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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_9599_9735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9599 - 9735

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

CCCCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

GTCTCCTTCATC

Flanking Amino Acid:

SQPVWTAAEQVDVALEDSLD

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

65.7

Major BPS

0.62

1.1

77.2

Major PPT

70.8

0.47

0.7

63.9

24.5

Minor 5ss

28.5

-2.5

3.6

41.2

45.5

Minor BPS

63.9

0.42

1.8

70.68

41.2

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040988

8619 - 14750

6132

ENSAPLT00000004583

8619 - 14750

6132