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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006426.1_1092_1623_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1092 - 1623

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCGGGCAAC

5'SS Class:

major

3'SS Sequence:

ACCGGGCGAGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGCGAC

U12 Branch Point Sequence:

TGCGACGGGACC

Flanking Amino Acid:

NRRAKWKRVKSPATAATAAG

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

67.6

40.7

Major BPS

44.6

-0.3

1.3

39.2

40.8

Major PPT

48.8

-0

1.1

39.4

38.5

Minor 5ss

22.5

-3.2

3.8

32.5

42.8

Minor BPS

38.7

-0.9

2.2

47.94

41.9

Associated Gene:

Gene:

GBX2

Ensembl Gene ID:

ENSAPLG00000026845

Chromosome:

PEDO01006426.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026585

257 - 1725

1469