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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006441.1_2229_2762_R

Intron Information:

Intron Rank:

147630

Intron Class:

major

Intron Phase:

Intron Coordinates:

2229 - 2762

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CACTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

CCTCCCTCACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

70.7

0.47

0.8

61.6

34.6

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

47.4

-0.2

1.8

55.52

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026772

Chromosome:

PEDO01006441.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039674

2143 - 8089

5947