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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006441.1_388_7974_R

Intron Information:

Intron Rank:

147629

Intron Class:

major

Intron Phase:

Intron Coordinates:

388 - 7974

Intron Length:

7587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCGGGCTCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

52.1

0.05

1.3

41.8

Major PPT

82.3

0.73

0.7

77.1

24.7

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

39.8

-0.6

2.2

50.86

49.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026772

Chromosome:

PEDO01006441.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030588

290 - 8089

7800