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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006444.1_3378_3519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3378 - 3519

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

TCTTGCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

TTTTTCTTGCTT

Flanking Amino Acid:

LRNLQRAQMTAALSADPTVL

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

65.8

40.2

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

0.81

0.8

80.4

31.6

Minor 5ss

34.8

-1.7

2.8

36.3

40.5

Minor BPS

49.2

0.02

3.5

86.06

34.4

Associated Gene:

Gene:

HES4

Ensembl Gene ID:

ENSAPLG00000030722

Chromosome:

PEDO01006444.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035460

2487 - 4244

1758