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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006445.1_5556_5933_F

Intron Information:

Intron Rank:

149535

Intron Class:

major

Intron Phase:

Intron Coordinates:

5556 - 5933

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTATGTATG

5'SS Class:

major

3'SS Sequence:

CCCATGCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

ACAATCTAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

74.4

41.9

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

66.9

0.38

0.9

57.3

38.6

Minor 5ss

46.8

-0.3

2.5

58.8

39.3

Minor BPS

47.6

-0.1

1.8

60.79

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030473

Chromosome:

PEDO01006445.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047596

4144 - 6344

2201

ENSAPLT00000036793

4144 - 6344

2201