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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006468.1_3083_4320_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3083 - 4320

Intron Length:

1238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTTACTTCC

5'SS Class:

weak_major

3'SS Sequence:

TGGGAACTCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATGGAA

U12 Branch Point Sequence:

GCTCTGGGAACT

Flanking Amino Acid:

AGVICSGKGSVSLVAPGFVR

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.4

0.01

1.3

52.9

39.4

Major BPS

46.9

-0.1

1.3

44.7

38.6

Major PPT

59.8

0.22

50.5

42.8

Minor 5ss

45.6

-0.5

2.4

61.2

36.8

Minor BPS

39.1

-0.7

2.5

58.31

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024685

Chromosome:

PEDO01006468.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034440

20 - 5651

5632