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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006485.1_542_1746_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

542 - 1746

Intron Length:

1205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGCGTGAC

5'SS Class:

weak_major

3'SS Sequence:

TCTAACCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TCCCCTCTAACC

Flanking Amino Acid:

GQSKGYGFITFAEAECARRA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.3

54.2

39.4

Major BPS

72.3

0.55

73.3

28.9

Major PPT

68.9

0.42

0.9

58.7

37.9

Minor 5ss

28.3

-2.5

3.3

38.1

40.6

Minor BPS

55.2

0.14

1.7

64.28

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019117

Chromosome:

PEDO01006485.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023285

21 - 2044

2024