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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006513.1_354_476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

354 - 476

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GTGCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TGCTCACCAAAG

Flanking Amino Acid:

NQKGYADYKLRLAKATLTLI

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

80.1

0.68

0.9

37.2

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

41.1

-0.8

2.1

48.23

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007383

Chromosome:

PEDO01006513.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007680

7 - 2988

2982