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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006515.1_1594_2081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1594 - 2081

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CGCCCCCTAATA

Flanking Amino Acid:

HNFSQQCLRMGKEKYKFPNP

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

40.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

86.8

0.83

0.7

81.7

29.5

Minor 5ss

31.2

-2.2

3.2

36.8

41.4

Minor BPS

50.4

0.01

1.7

58.2

41.5

Associated Gene:

Gene:

EIF3D

Ensembl Gene ID:

ENSAPLG00000002632

Chromosome:

PEDO01006515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027828

21 - 4950

4930

ENSAPLT00000002671

21 - 5395

5375