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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006515.1_2898_3774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2898 - 3774

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

CTCCCGTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

GAATTCAGAATT

Flanking Amino Acid:

LLAGSEYLKLGYVSRYHVKD

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

60.5

45.8

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

70.1

0.45

0.8

61.3

Minor 5ss

29.7

-2.3

3.2

30.2

42.9

Minor BPS

48.7

-0

1.7

64.86

Associated Gene:

Gene:

EIF3D

Ensembl Gene ID:

ENSAPLG00000002632

Chromosome:

PEDO01006515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027828

21 - 4950

4930

ENSAPLT00000002671

21 - 5395

5375