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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006515.1_290_420_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

290 - 420

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTAG

5'SS Class:

major

3'SS Sequence:

GGCCGCACAGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCGCAC

U12 Branch Point Sequence:

TCTGGCCGCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

68.2

39.5

Major BPS

-0.5

1.4

39.9

Major PPT

52.4

0.05

44.5

36.3

Minor 5ss

42.5

-0.8

49.2

Minor BPS

37.8

-0.9

2.4

52.3

45.6

Associated Gene:

Gene:

EIF3D

Ensembl Gene ID:

ENSAPLG00000002632

Chromosome:

PEDO01006515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027828

21 - 4950

4930

ENSAPLT00000002671

21 - 5395

5375