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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006530.1_3917_4327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3917 - 4327

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

CTCCCCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

CCCCGCAAAACT

Flanking Amino Acid:

LPLAQFAVTLRSRLCLASSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

1.1

61.8

43.5

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

71.1

0.47

0.9

64.5

36.5

Minor 5ss

37.2

-1.5

3.4

50.7

Minor BPS

40.2

-0.6

2.2

53.49

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022044

Chromosome:

PEDO01006530.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026427

3403 - 4729

1327