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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006534.1_1555_1870_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1555 - 1870

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGTTGCAT

5'SS Class:

weak_major

3'SS Sequence:

GGGTGTGGCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTGCAC

U12 Branch Point Sequence:

TTGCACAGAGCA

Flanking Amino Acid:

AGLLQSMLHGGALHRASHGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.5

0.18

1.1

51.1

41.1

Major BPS

48.9

-0

1.5

63.1

44.5

Major PPT

0.07

1.1

45.8

Minor 5ss

32.7

-2

3.3

38.2

46.8

Minor BPS

-0.6

56.42

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019515

Chromosome:

PEDO01006534.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036174

187 - 1937

1751

ENSAPLT00000033200

52 - 1937

1886