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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006534.1_264_999_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

264 - 999

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCTCCTTGC

5'SS Class:

weak_major

3'SS Sequence:

GCCTCCAAGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGTGAA

U12 Branch Point Sequence:

GGGAGTGAAACT

Flanking Amino Acid:

AGPHPEAGGLGLRGWQRLCR

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.4

47.1

45.4

Major BPS

48.6

-0

1.3

41.1

41.4

Major PPT

43.7

-0.3

1.7

43.4

36.5

Minor 5ss

31.2

-2.2

3.9

39.7

Minor BPS

36.1

-0.9

2.3

49.38

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019515

Chromosome:

PEDO01006534.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036174

187 - 1937

1751