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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006542.1_271_1830_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

271 - 1830

Intron Length:

1560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

GTATCTAAGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTAAG

U12 Branch Point Sequence:

TTTTGCAGAATT

Flanking Amino Acid:

SKNACGIPCSGLLRKAPSVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

73.7

33.1

Major BPS

61.8

0.29

1.5

69.7

35.5

Major PPT

0.2

1.1

52.1

45.9

Minor 5ss

38.7

-1.3

2.9

47.9

47.8

Minor BPS

53.5

0.19

2.1

81.93

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019643

Chromosome:

PEDO01006542.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019769

3 - 1973

1971