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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006542.1_51_131_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51 - 131

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTCCGGTTT

5'SS Class:

weak_major

3'SS Sequence:

AGCAAATTACGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GGAATTTTGACA

Flanking Amino Acid:

GDGVCMYTSRSGFNTQATNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.4

61.5

45.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

43.4

-0.3

1.7

36.9

43.4

Minor 5ss

36.6

-1.5

3.6

47.3

48.1

Minor BPS

52.4

0.07

1.3

56.73

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019643

Chromosome:

PEDO01006542.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019769

3 - 1973

1971