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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006568.1_2201_2658_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2201 - 2658

Intron Length:
458

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTGAGTGGC

5'SS Class:
major

3'SS Sequence:
CCCCACATTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAC

U12 Branch Point Sequence:
CTGTGCTCACTT

Flanking Amino Acid:
FGTAVARLIAISLYTGGTLL

Intron Amino Acid Position:
308

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1
68.7
36.5

Major BPS
69.8
0.49
1.1
71.3
36.7

Major PPT
70.2
0.45
0.9
65.4
34.4

Minor 5ss
30
-2.3
3.2
39
39.8

Minor BPS
45.1
-0.2
2.2
63.28
47.5

Associated Gene:

Gene:
SLC43A3

Ensembl Gene ID:

Chromosome:
PEDO01006568.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 4054
4034

21 - 4054
4034