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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006571.1_1702_2006_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1702 - 2006

Intron Length:

305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGCAGGGT

5'SS Class:

weak_major

3'SS Sequence:

TGCAGATGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TGTGCTGTCACT

Flanking Amino Acid:

RGEGTVVVVLAGQGFQLHQP

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.1

50.1

40.7

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

56.5

0.15

1.1

46.3

44.9

Minor 5ss

23.9

-3

3.7

34.6

43.7

Minor BPS

46.6

-0.1

2.4

71.8

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019310

Chromosome:

PEDO01006571.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038227

554 - 2461

1908