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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006571.1_601_1409_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

601 - 1409

Intron Length:

809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAAGAGT

5'SS Class:

weak_major

3'SS Sequence:

AGCCCCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAC

U12 Branch Point Sequence:

CTCCCCACAACA

Flanking Amino Acid:

YCVKFRKTATTASARPAPAL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.1

56.9

41.9

Major BPS

57.7

0.19

1.2

66.7

Major PPT

67.1

0.39

0.9

58.7

32.3

Minor 5ss

30.1

-2.3

3.3

44.6

44.3

Minor BPS

-0

1.9

62.21

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019310

Chromosome:

PEDO01006571.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038227

554 - 2461

1908