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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006579.1_1267_1378_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1267 - 1378

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAGGGGGA

5'SS Class:

weak_major

3'SS Sequence:

CTTCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCACCAT

U12 Branch Point Sequence:

CAGGCACCATCC

Flanking Amino Acid:

VITQGRDSQIHEDFVTKFYV

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.1

Major BPS

44.2

-0.3

1.4

48.7

44.6

Major PPT

78.4

0.64

0.7

73.1

25.1

Minor 5ss

29.4

-2.4

3.8

41.8

46.2

Minor BPS

33.7

-1.2

37.59

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025207

Chromosome:

PEDO01006579.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032802

13 - 1845

1833