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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006580.1_2080_2177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2080 - 2177

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTCCTCATGATT

Flanking Amino Acid:

TKLVEQAAEIEEKAARLEEQ

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

53.5

0.19

1.6

72.88

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019344

Chromosome:

PEDO01006580.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030417

21 - 3791

3771