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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006601.1_1354_1523_R

Intron Information:

Intron Rank:

139542

Intron Class:

major

Intron Phase:

Intron Coordinates:

1354 - 1523

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTCTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TAACCCTTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

40.6

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

75.3

0.57

0.8

72.3

32.3

Minor 5ss

31.2

-2.2

3.2

36.8

41.4

Minor BPS

59.6

0.28

1.6

66.14

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022549

Chromosome:

PEDO01006601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045953

142 - 2609

2468