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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006628.1_661_2398_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

661 - 2398

Intron Length:

1738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGTGAGTG

5'SS Class:

weak_major

3'SS Sequence:

TATTTTTTCTGAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

AACTCCTCAAGG

Flanking Amino Acid:

SYYAYVVELCFLFVVESPPC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.1

53.3

37.6

Major BPS

73.1

0.58

73.8

32.3

Major PPT

0.38

1.7

80.8

36.5

Minor 5ss

37.3

-1.4

3.5

52.3

45.9

Minor BPS

49.9

-0.1

1.9

55.28

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027839

Chromosome:

PEDO01006628.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028129

548 - 2480

1933