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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006639.1_1302_1393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1302 - 1393

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

CCCCCCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CTGCCCCTAACC

Flanking Amino Acid:

PTKGHTGLIVDGELYSATFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

64.7

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

75.2

0.57

0.8

68.2

25.3

Minor 5ss

31.2

-2.1

3.4

34.3

Minor BPS

59.9

0.29

1.8

68.8

42.6

Associated Gene:

Gene:

SEMA4C

Ensembl Gene ID:

ENSAPLG00000022065

Chromosome:

PEDO01006639.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036026

8 - 4104

4097

ENSAPLT00000027181

8 - 3256

3249

ENSAPLT00000018728

1190 - 4104

2915