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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006639.1_191_334_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

191 - 334

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCACCGGC

5'SS Class:

weak_major

3'SS Sequence:

CCCCCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCCC

U12 Branch Point Sequence:

CCCCCCTTCCCC

Flanking Amino Acid:

VGAREAVFALISWEAPVEKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

55.9

42.7

Major BPS

25.8

-1.5

54.6

40.8

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

27.5

-2.6

4.1

38.8

41.7

Minor BPS

37.4

-1

3.5

50.92

46.3

Associated Gene:

Gene:

SEMA4C

Ensembl Gene ID:

ENSAPLG00000022065

Chromosome:

PEDO01006639.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027181

8 - 3256

3249