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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006639.1_2015_2096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2015 - 2096

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

ACTGTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

CAAACCTTCACT

Flanking Amino Acid:

TTFFGVFQARWGDVDVSAIC

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

58.5

40.7

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

74.2

0.54

0.9

66.6

Minor 5ss

31.4

-2.1

3.2

35.7

42.1

Minor BPS

57.3

0.31

1.9

70.93

45.3

Associated Gene:

Gene:

SEMA4C

Ensembl Gene ID:

ENSAPLG00000022065

Chromosome:

PEDO01006639.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018728

1190 - 4104

2915

ENSAPLT00000036026

8 - 4104

4097