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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006639.1_2553_2627_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2553 - 2627

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTTGC

5'SS Class:

major

3'SS Sequence:

CCACGGCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CGCCCCTCACCC

Flanking Amino Acid:

TIYEVLFIGTGDGWVHKALN

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.2

64.3

43.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

58.2

0.19

0.9

49.7

33.9

Minor 5ss

-0.5

2.9

62.1

42.5

Minor BPS

46.4

-0.2

1.9

52.77

44.6

Associated Gene:

Gene:

SEMA4C

Ensembl Gene ID:

ENSAPLG00000022065

Chromosome:

PEDO01006639.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036026

8 - 4104

4097

ENSAPLT00000027181

8 - 3256

3249

ENSAPLT00000018728

1190 - 4104

2915