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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006639.1_2991_3066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2991 - 3066

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TCTCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCT

Flanking Amino Acid:

SLCVRTEGLNGSQLVQDVLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.7

46.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

78.3

0.64

0.7

25.1

Minor 5ss

28.2

-2.5

3.4

29.1

43.5

Minor BPS

47.5

-0.1

1.9

61.08

48.3

Associated Gene:

Gene:

SEMA4C

Ensembl Gene ID:

ENSAPLG00000022065

Chromosome:

PEDO01006639.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036026

8 - 4104

4097

ENSAPLT00000021647

2420 - 4104

1685