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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006639.1_398_497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

398 - 497

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGGGGG

5'SS Class:

major

3'SS Sequence:

CCCCCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAT

U12 Branch Point Sequence:

CCCCCGTCAATT

Flanking Amino Acid:

ECIQKGKNNQTDCFNYVRFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.3

43.3

Major BPS

64.5

0.36

1.2

72.7

34.4

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

23.6

-3

3.4

29.4

43.4

Minor BPS

-0.3

2.2

56.83

46.2

Associated Gene:

Gene:

SEMA4C

Ensembl Gene ID:

ENSAPLG00000022065

Chromosome:

PEDO01006639.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036026

8 - 4104

4097

ENSAPLT00000027181

8 - 3256

3249