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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006642.1_427_580_R

Intron Information:

Intron Rank:

145173

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

427 - 580

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTT|GCGCGTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTGCGCGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

CACGTTTGAGGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.4

62.2

42.1

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

68.9

0.43

66.3

40.7

Minor 5ss

31.9

-2.1

4.3

54.2

44.5

Minor BPS

34.9

-1.2

1.7

27.67

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025523

Chromosome:

PEDO01006642.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024419

21 - 1157

1137