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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006647.1_3747_4488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3747 - 4488

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAC

U12 Branch Point Sequence:

TTCACGTCATTT

Flanking Amino Acid:

LDIEAKKTDLRVMELEARRL

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

68.7

0.46

71.3

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

43.1

-0.4

2.4

64.55

46.2

Associated Gene:

Gene:

NDUFB5

Ensembl Gene ID:

ENSAPLG00000011659

Chromosome:

PEDO01006647.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012145

153 - 4609

4457