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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006659.1_1372_1862_R

Intron Information:

Intron Rank:

129919

Intron Class:

major

Intron Phase:

Intron Coordinates:

1372 - 1862

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGTTA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

TTAACCTGCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

75.7

36.7

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

83.9

0.76

0.7

80.1

Minor 5ss

45.9

-0.4

3.2

64.4

Minor BPS

56.5

0.28

78.98

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017084

Chromosome:

PEDO01006659.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026519

687 - 2442

1756