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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006682.1_673_1385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

673 - 1385

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACG

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGTTTTTACTT

Flanking Amino Acid:

IILHEGKAVKAGKAFRKFLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

41.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

78.9

0.65

0.9

73.1

36.6

Minor 5ss

32.4

-2

3.1

40.6

45.3

Minor BPS

58.9

0.36

1.6

72.92

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030002

Chromosome:

PEDO01006682.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022709

21 - 1435

1415