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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006688.1_1275_1385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1275 - 1385

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TTCTCCTCCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

GTTTCCCCAACC

Flanking Amino Acid:

GPHISPRPGSCSMGPSSDKA

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

62.4

37.7

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

81.5

0.71

0.7

76.9

25.1

Minor 5ss

30.5

-2.2

3.1

36.8

40.4

Minor BPS

61.9

0.35

1.9

76.97

38.6

Associated Gene:

Gene:

SEMA4A

Ensembl Gene ID:

ENSAPLG00000010052

Chromosome:

PEDO01006688.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010463

59 - 3325

3267