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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006688.1_1525_1625_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1525 - 1625

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

GGCAAGCGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CTGTCCCCACAG

Flanking Amino Acid:

ADFYAVFTSQWAGSAAVCVY

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

58.5

40.7

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

-0.1

1.1

34.8

40.8

Minor 5ss

33.8

-1.8

40.2

39.7

Minor BPS

40.1

-0.8

2.1

45.45

46.4

Associated Gene:

Gene:

SEMA4A

Ensembl Gene ID:

ENSAPLG00000010052

Chromosome:

PEDO01006688.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010463

59 - 3325

3267