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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006688.1_1958_2077_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1958 - 2077

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCCTGAGGG

5'SS Class:

weak_major

3'SS Sequence:

CTTCTTCTTCGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAT

U12 Branch Point Sequence:

GCATCCCCAACG

Flanking Amino Acid:

ERGAGSSLGRETADEFDFFE

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.3

48.7

44.3

Major BPS

50.7

0.02

1.5

44.2

Major PPT

66.1

0.36

1.7

72.9

37.4

Minor 5ss

20.6

-3.4

3.8

20.9

37.4

Minor BPS

48.3

-0.2

54.51

45.7

Associated Gene:

Gene:

SEMA4A

Ensembl Gene ID:

ENSAPLG00000010052

Chromosome:

PEDO01006688.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036290

166 - 3421

3256