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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006688.1_2089_2124_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2089 - 2124

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCT|GCAGGGTCC

5'SS Class:

weak_major

3'SS Sequence:

TCAATCCCCAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATCAAT

U12 Branch Point Sequence:

TCCCCATCAATC

Flanking Amino Acid:

WLSGERGAGSSLGRETADEF

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.5

57.2

38.8

Major BPS

56.8

0.17

1.3

66.4

36.8

Major PPT

57.3

0.16

56.3

33.7

Minor 5ss

29.2

-2.4

4.4

51.1

45.7

Minor BPS

48.1

-0.1

1.8

57.18

41.6

Associated Gene:

Gene:

SEMA4A

Ensembl Gene ID:

ENSAPLG00000010052

Chromosome:

PEDO01006688.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036290

166 - 3421

3256