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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006688.1_2263_2379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2263 - 2379

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCCGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CGTCCCCGAGCA

Flanking Amino Acid:

PQHTYTALLVDGELYAGTMN

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.4

40.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

60.3

0.23

35.1

Minor 5ss

30.2

-2.3

2.5

26.6

35.9

Minor BPS

-0.4

55.87

42.3

Associated Gene:

Gene:

SEMA4A

Ensembl Gene ID:

ENSAPLG00000010052

Chromosome:

PEDO01006688.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036290

166 - 3421

3256

ENSAPLT00000010463

59 - 3325

3267