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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006688.1_2480_2764_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2480 - 2764

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GCAGCACCTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTTCCGCAGCA

Flanking Amino Acid:

YAFSPACTYINFTLVSSGKS

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.3

Major BPS

0.57

73.6

28.6

Major PPT

45.6

-0.2

1.7

43.8

37.6

Minor 5ss

-2.3

3.1

36.6

34.4

Minor BPS

50.1

-0

2.4

75.78

41.6

Associated Gene:

Gene:

SEMA4A

Ensembl Gene ID:

ENSAPLG00000010052

Chromosome:

PEDO01006688.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010463

59 - 3325

3267