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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006688.1_2864_2963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2864 - 2963

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTCAC

U12 Branch Point Sequence:

GCATCGTCACCC

Flanking Amino Acid:

ECAFKKKSRETECFNFIRVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

78.2

31.2

Major BPS

62.4

0.31

1.2

65.3

41.6

Major PPT

70.8

0.47

0.9

64.8

30.7

Minor 5ss

27.1

-2.6

42.4

Minor BPS

42.3

-0.6

2.4

52.02

44.9

Associated Gene:

Gene:

SEMA4A

Ensembl Gene ID:

ENSAPLG00000010052

Chromosome:

PEDO01006688.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010463

59 - 3325

3267