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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006690.1_1547_1611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1547 - 1611

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCGGGCTCACCG

Flanking Amino Acid:

QEGQFHYNISQVKVLDLQLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

52.1

0.05

1.3

41.8

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

36.9

-1.1

2.1

34.2

46.5

Associated Gene:

Gene:

PLTP

Ensembl Gene ID:

ENSAPLG00000013839

Chromosome:

PEDO01006690.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014425

171 - 3386

3216