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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006690.1_2005_2701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2005 - 2701

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

GCTCTGCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCCAC

U12 Branch Point Sequence:

ACCGGCCCACGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.2

37.5

Major BPS

41.9

-0.5

1.3

43.8

40.8

Major PPT

72.3

0.5

0.9

61.8

Minor 5ss

39.9

-1.1

2.8

57.3

39.7

Minor BPS

27.5

-1.7

28.47

36.4

Associated Gene:

Gene:

PLTP

Ensembl Gene ID:

ENSAPLG00000013839

Chromosome:

PEDO01006690.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014425

171 - 3386

3216