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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006690.1_602_692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

602 - 692

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

TTTGCCATGACA

Flanking Amino Acid:

LLNSLLDTVPVKNYVDDHIG

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.9

35.3

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

0.58

0.9

72.7

32.1

Minor 5ss

33.5

-1.9

3.4

47.6

Minor BPS

65.7

0.49

1.7

79.66

36.3

Associated Gene:

Gene:

PLTP

Ensembl Gene ID:

ENSAPLG00000013839

Chromosome:

PEDO01006690.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014425

171 - 3386

3216