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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006696.1_42391_42494_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42391 - 42494

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCGGGAGG

5'SS Class:

major

3'SS Sequence:

ATCCACACTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCACAC

U12 Branch Point Sequence:

TTGTCCCCCACC

Flanking Amino Acid:

GRSYNIREARRWPFTCHECG

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

63.7

40.6

Major BPS

55.2

0.13

1.1

62.9

34.3

Major PPT

48.3

-0.1

1.7

51.9

Minor 5ss

15.4

-4

3.5

37.3

Minor BPS

47.8

-0.1

2.3

67.41

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007180

Chromosome:

PEDO01006696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007455

41274 - 46666

5393