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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006696.1_42620_42661_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42620 - 42661

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAACTCA

5'SS Class:

strong_major

3'SS Sequence:

GTGAAGCTCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

ACAGCACCAACC

Flanking Amino Acid:

GQSKGNLAQKEPSGEARLEP

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

1.1

63.3

42.5

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

48.8

-0

1.1

41.4

42.9

Minor 5ss

33.2

-1.9

47.9

47.8

Minor BPS

40.6

-0.7

48.13

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007180

Chromosome:

PEDO01006696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007455

41274 - 46666

5393