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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006709.1_1092_1389_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1092 - 1389

Intron Length:
298

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACGGGC

5'SS Class:
major

3'SS Sequence:
GCTTCCTCTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAC

U12 Branch Point Sequence:
CAGTGCTCACCC

Flanking Amino Acid:
VSRSQRAGLQFPVGRIHRHL

Intron Amino Acid Position:
39

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.58
1.2
64.8
41.3

Major BPS
69.8
0.49
1.1
71.3
36.7

Major PPT
79.8
0.67
0.8
73.3
31.6

Minor 5ss
35.1
-1.7
3.6
50.2
46.4

Minor BPS
43.4
-0.5
2.2
51.25
45.7

Associated Gene:

Gene:
H2AZ2

Ensembl Gene ID:

Chromosome:
PEDO01006709.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 1503
1483