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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006742.1_940_985_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

940 - 985

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTTTTTGCT

5'SS Class:

weak_major

3'SS Sequence:

CCACCCCTTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGGAAA

U12 Branch Point Sequence:

GCTCCCTGCAGG

Flanking Amino Acid:

EPGWALTLLWAEEKQSDPCS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.15

1.2

56.4

40.7

Major BPS

40.6

-0.5

1.3

39.1

Major PPT

50.3

0.01

1.7

57.4

Minor 5ss

37.4

-1.4

43.5

43.7

Minor BPS

42.3

-0.7

2.2

46.32

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014698

Chromosome:

PEDO01006742.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015309

135 - 1048

914