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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006745.1_2035_2378_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2035 - 2378

Intron Length:
344

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGGCCG

5'SS Class:
major

3'SS Sequence:
TTTCCTTCCAAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATAAAT

U12 Branch Point Sequence:
TTTCCTTCCAAA

Flanking Amino Acid:
KNIFGTPEFVAPEIVNYEPL

Intron Amino Acid Position:
185

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1.1
54
44.7

Major BPS
65.7
0.39
1
71.3
30.3

Major PPT
73.1
0.52
1
74.6
27.9

Minor 5ss
25.2
-2.9
3
22.7
36.8

Minor BPS
47.4
-0.2
2
66.41
39.8

Associated Gene:

Gene:
DAPK3

Ensembl Gene ID:

Chromosome:
PEDO01006745.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

844 - 5502
4659

21 - 5502
5482