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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006745.1_2605_2688_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2605 - 2688

Intron Length:
84

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTGAGTATC

5'SS Class:
major

3'SS Sequence:
GCTCTCGCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGCGAC

U12 Branch Point Sequence:
TGGGGTGCGACC

Flanking Amino Acid:
MWSIGVITYILLSGASPFLG

Intron Amino Acid Position:
210

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.1
74.7
35.4

Major BPS
42.5
-0.4
1.4
35.6
42.9

Major PPT
68.1
0.41
0.9
61.3
35

Minor 5ss
37.8
-1.4
3
55.7
41.6

Minor BPS
34.2
-1.2
2.3
41.53
39.8

Associated Gene:

Gene:
DAPK3

Ensembl Gene ID:

Chromosome:
PEDO01006745.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

844 - 5502
4659

21 - 5502
5482